FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences990833
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTCGGG3200.00783451313.42470556
AGCGATT6550.0088838778.7483792
CTTTAAA12708.2838105E-46.79848431
TCAGATT12000.00358028576.56584022
TTTAAAA24003.0645236E-45.07360362
Produced by FastQC (version 0.11.5)