FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences949762
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCTGGGG2700.002974624515.5330818
CCCCCCC1903.8898832E-48.0939840-44
TACGTCG2700.00400420326.4971485125-129
CCACCGC11850.00405008076.48884446
Produced by FastQC (version 0.11.5)