FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1190290
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AAATAGG6950.00143187899.2416536
CTGAAGT7900.0044115838.1628911
GGGGGGG2000.00466264277.13810975-79
CCACAAA12054.770952E-47.13547371
CTTTGAG11500.00228249846.8536741
TTGTATT19300.00298221085.18443782
Produced by FastQC (version 0.11.5)