FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003570

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003570
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1311629
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGCAT8100.0049544118.0584461
ATTTACC12558.629891E-57.4739916
ACTTGCA12250.0041192486.47877657
CCCAGAT13250.008820876.02102761
CGCCGAT17406.6892314E-45.8354271
ATTTCAG23008.321149E-45.01932246
Produced by FastQC (version 0.11.5)