FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003934

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003934
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1768999
Sequences flagged as poor quality0
Sequence length100-151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGATT11200.00181407267.00499731
CGGAGTC12600.0065186936.19973664
CACAAAT12800.0073378746.1293731
GTCAAAT15500.00851677455.52182771
CTTGCCT17900.00755882455.1575268
Produced by FastQC (version 0.11.5)