FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003961

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003961
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences508403
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGGGGG850.00210345912.715502115-119
AATTCAG5059.886779E-512.3402875
TTCGTAA4450.006677216410.8921148
CAACATT5954.37482E-410.5140161
CTCGCAA1200.00435468289.542242100-104
AAACATT7600.0042124568.2030232
CATAACC4407.8115414E-45.042578725-29
Produced by FastQC (version 0.11.5)