FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003966

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003966
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1757282
Sequences flagged as poor quality0
Sequence length100-151
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCAAAT13652.4236625E-46.87351271
CGATTTA11700.00255164046.7819144
CTTTTAG12150.00377071886.534081
CTACATT16704.2641914E-46.04448468
CTTCCGT18300.008101575.12696461
Produced by FastQC (version 0.11.5)