Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005003971 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 632161 |
Sequences flagged as poor quality | 0 |
Sequence length | 100-151 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CACGTCT | 190 | 0.0064221984 | 18.792822 | 9 |
CACTGGT | 330 | 0.009464445 | 13.045007 | 1 |
CTTTGAT | 1080 | 1.3252985E-4 | 7.9719486 | 1 |
GTCAAAA | 835 | 0.007159537 | 7.733268 | 1 |
CAATAAT | 1090 | 0.0012747983 | 7.240577 | 1 |
CTTGAAA | 1250 | 0.0053801965 | 6.313783 | 1 |