FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003971

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003971
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences632161
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACGTCT1900.006422198418.7928229
CACTGGT3300.00946444513.0450071
CTTTGAT10801.3252985E-47.97194861
GTCAAAA8350.0071595377.7332681
CAATAAT10900.00127479837.2405771
CTTGAAA12500.00538019656.3137831
Produced by FastQC (version 0.11.5)