FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003973

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003973
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences609860
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAATAA6851.08921224E-410.4132293
TCGTATT6305.8145093E-410.1951032
AATTTAC6356.281544E-410.1098515
CTTTAAT8206.21747E-48.7555651
CTTTTAT12054.6516774E-47.14977261
CTGAAAA13550.00176441766.3582851
CCGGCAT12700.00630071576.2185191
Produced by FastQC (version 0.11.5)