FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003986

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003986
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences560351
Sequences flagged as poor quality0
Sequence length100-151
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAAACTA3100.006875021413.6909834
CAGGTCA4250.00404371211.6507593
CAAGGAT6250.0063774929.1079461
CAATAAT10350.00669084356.874961
TTTTGAA15500.0092963715.4763932
ATTTTAT17500.0056476045.28586151
Produced by FastQC (version 0.11.5)