FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003989

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003989
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1790725
Sequences flagged as poor quality0
Sequence length100-151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAAAT8306.4196455E-48.7295871
CCCGAAT10500.0064710956.900531
AATTTTA18353.324505E-56.2843125
CCCAGAT18854.5555862E-56.15007451
ATTTAAT13100.0079241586.0840551
GTTCAAC15550.00112385726.05737831
CTCCGAT15900.00146781285.924041
CCCGGTT14950.0047994755.81583171
CAATTTT17850.00615363345.24902774
TCAATGT19550.00315381755.16168453
CTGTTGT18400.00824735.1191431
CTCAAAA18450.0085123465.105271
Produced by FastQC (version 0.11.5)