FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005003990

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005003990
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences894081
Sequences flagged as poor quality0
Sequence length100-151
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTTAGGA2800.00280186815.6729621
CTTGGAT4957.3153607E-411.8206851
CTTCGCT6657.6330523E-49.8987131
GTATCGT6758.7531406E-49.7520661
CTCATAA8850.00110430658.2644621
GTATTCT11700.00220249136.8764561
CTTCATT15450.00621699085.68081471
GTTTCTT17150.0032251145.54417661
Produced by FastQC (version 0.11.5)