FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004278

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004278
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences756036
Sequences flagged as poor quality0
Sequence length100-151
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACTCGTG1950.00708382218.4767954
CACTGTG3600.004051137214.827528145
GACTGGC4700.0074617410.7315557
GTTCGAT4850.00917292610.4369271
TTCGATT7750.00351047568.3715222
ATATTCG8400.00727258257.72014958
Produced by FastQC (version 0.11.5)