FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75805440
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC651550.015.7884459
AGAGCGT703800.014.68775758
GATCGGA741100.014.0379431
ATCGGAA765850.013.7423152
TCGGAAG794550.013.2748933
AAGAGCG819600.012.824827
CGGAAGA825350.012.7970724
CGCCGTA245350.010.60153755-59
TCGCCGT268800.09.69284555-59
GCCGTAT279200.09.38891755-59
CGTATCA305200.08.62734160-64
GTCGCCG307200.08.51427755-59
GAAGAGC1310800.08.4558756
TGGTCGC328950.08.06135450-54
GTGGTCG346250.07.775821750-54
CCGTATC301500.06.934634760-64
TCTCGGT435900.06.306478545-49
GGTCGCC345850.06.087112455-59
GGAAGAG1943550.05.98268565
CGGTGGT461000.05.90005550-54
Produced by FastQC (version 0.11.5)