FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40175390
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG95300.06.4658875145
CGCCGTA25100.05.892245355-59
TCGCCGG26904.8897047E-55.120394145
GCGTCGG28452.2671873E-55.09624145
GCGTCGT86500.05.0956807140-144
GATCGGA146300.05.004713145
Produced by FastQC (version 0.11.5)