FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004369

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004369
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65593133
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG146400.09.16166845-49
GATCGGA481450.08.3210091
ATCGGAA506600.08.0340712
TCGGAAG523500.07.81025553
CTCGTAT173000.07.560194540-44
CGTATGC174700.07.544749745-49
CGGAAGA549350.07.53513574
TCTCGTA169650.07.2735840-44
ATGCCGT186500.07.075162445-49
GCCGTCT204700.06.538351550-54
ATCTCGT206000.06.081617440-44
CGTCTTC238600.05.767401750-54
CCGTCTT247700.05.549664550-54
AGAGCAC868050.05.11951548
AGATCGG490800.05.037133145
Produced by FastQC (version 0.11.5)