FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80338790
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC48500.07.36244961
TATGCCG128100.07.096925745-49
GATCGGA545300.06.5215721
ATCGGAA561150.06.42635442
TCGGAAG577200.06.2797933
CGGAAGA602100.06.1284374
CTCGTAT152700.06.06766740-44
TCTCGTA151800.05.67380840-44
CGTATGC154550.05.497692645-49
ATGCCGT177950.05.39401145-49
GCGACCA76100.05.33463863
AGATCGG567550.05.3139644145
TAGATCG209450.05.2266817145
Produced by FastQC (version 0.11.5)