FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004408

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004408
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61819066
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG61300.06.9776897145
CGTCGTG394950.05.9840555145
AGATCGG690750.05.68851145
GTCGTGT406850.05.6842937145
GATCGGA654650.05.6367497145
AGCGTCG437250.05.5212135145
GCGTCGT403000.05.436271140-144
ATCGGAA661400.05.403845145
CGCCGTA108400.05.20317855-59
CGTGTAG409450.05.046196145
Produced by FastQC (version 0.11.5)