FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72507230
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC344350.010.7379839
AGAGCGT385600.09.8149058
GATCGGA407350.09.3029481
ATCGGAA428400.09.0038952
TCGGAAG442400.08.783763
CGGAAGA468650.08.3536554
AAGAGCG470350.08.2933437
CGCCGTA104350.08.01733955-59
TCGCCGT122900.07.03139155-59
GCGTCGG55200.06.4353456145
GCCGTAT139700.06.289601355-59
GTCGCCG140600.06.187465755-59
TGGTCGC162100.05.49200850-54
AGATCGG417400.05.4537106145
CGTATCA174600.05.298271760-64
GTGGTCG179000.05.0301950-54
Produced by FastQC (version 0.11.5)