FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004550

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004550
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27028938
Sequences flagged as poor quality0
Sequence length151
%GC42

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA45650.07.524286755-59
AGCGTCG140550.06.54818349
TCGCCGT55000.06.508666555-59
GCGTCGG31658.731149E-116.450309145
GCCGTAT56200.06.318114855-59
GAGCGTC166350.05.5761598
CGTATCA68050.05.15391960-64
AGAGCGT187650.05.0976897
Produced by FastQC (version 0.11.5)