FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004555

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004555
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73239490
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC57800.014.50021925-29
GTTGGAC320850.014.4057752
CGACGCT59450.014.39046225-29
CACGACG69500.012.28820220-24
CGTTGGA421050.011.0014941
TCCGATC82000.010.80430435-39
TGGACTA429350.010.7726654
TACACTC507600.09.2406319
CTACACT524250.08.9332878
ACTACAC512200.08.8884497
CCGATCT109650.08.41042535-39
TTCCGAT116150.07.989522530-34
ACACGAC114650.07.91695420-24
TACACGA115450.07.91233120-24
TTGGACT627150.07.7449273
GACGCTC125000.07.528514425-29
CTACACG135600.06.736568520-24
CTTCCGA151250.06.35591730-34
ACGCTCT150000.06.244761525-29
TATGCCG140250.06.07875545-49
Produced by FastQC (version 0.11.5)