FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004604

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004604
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61012426
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA80700.014.53502155-59
TCGCCGT96000.012.46015355-59
GAGCGTC341850.012.2797429
GTCGCCG107750.011.15521455-59
AGAGCGT385000.011.1103948
GCCGTAT112550.010.75676355-59
GATCGGA403250.010.4537871
ATCGGAA429300.09.9846492
TCGGAAG441500.09.802713
TGGTCGC124300.09.79842750-54
AAGAGCG455050.09.5274417
CGGAAGA472600.09.1574894
GTGGTCG137600.08.91456450-54
GCGTCGG43550.08.664041145
CGTATCA144100.08.48170660-64
TCTCGGT188050.06.946369645-49
CCGTATC132650.06.710899460-64
GGTCGCC132400.06.603435555-59
CGGTGGT205150.06.417449550-54
CTCGGTG215300.06.08738645-49
Produced by FastQC (version 0.11.5)