FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75680351
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA65600.08.86329155-59
GAGCGTC272050.07.59403329
TCGCCGT80300.07.258802455-59
GATCGGA315550.06.53846361
GTCGCCG92550.06.39202155-59
AGAGCGT328100.06.2082028
ATCGGAA349150.06.08440732
TCGGAAG365200.05.85573863
GCCGTAT107800.05.783678555-59
TGGTCGC115550.05.382895550-54
TAGATCG139050.05.3703146145
AAGAGCG403150.05.28641657
CGGAAGA405150.05.2604074
AGCGTCG208600.05.1785173145
Produced by FastQC (version 0.11.5)