FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004607

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004607
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72256184
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC31700.08.55392125-29
CGACGCT34850.07.98879625-29
CACGACG41100.07.0912320-24
GTTGGAC293000.05.89215952
GATCGGA383150.05.681223145
AGATCGG412850.05.571297145
ATCGGAA404400.05.436518145
TCGGAAG424450.05.299373145
TAGATCG149700.05.234694145
TCCGATC58500.05.105810635-39
CGTTGGA335600.05.04437261
Produced by FastQC (version 0.11.5)