FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences32829541
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG22900.09.18048145
TAGATCG83200.06.186398145
GAGCGTC165150.06.1454306145
AGCGTCG134250.05.83193145
GCGTCGT124550.05.7040744145
AGATCGG221200.05.636976145
ATCGGAA214050.05.3849883145
GATCGGA205650.05.322934145
CGTCGTG121150.05.301987140-144
TCGGAAG216400.05.192509145
GTCGTGT137000.05.0798807145
TCGTGTA135300.05.036547145
Produced by FastQC (version 0.11.5)