FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66748920
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC37800.013.4692921
GCGACCA56500.09.2386313
GGCGACC62750.09.0234562
CGACCAC73950.07.25464964
GATCGGA356150.05.9639215145
ACCGAGA110900.05.4908489
ATCGGAA374300.05.3454776145
AGATCGG384700.05.3328757145
Produced by FastQC (version 0.11.5)