FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004725

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004725
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65176450
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC27050.06.32532925-29
GATCGGA489050.06.022109145
ATCGGAA502100.05.923378145
AGATCGG517450.05.7476625145
CGACGCT30950.05.62197625-29
ACACGTC360200.05.5985675145
ACGTCTG384500.05.2636094145
TCGGAAG504250.05.2076106145
TAGATCG189100.05.1990724140-144
CGGAAGA523350.05.0452766145
Produced by FastQC (version 0.11.5)