FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004775

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004775
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51275671
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA540300.013.487691
TATGCCG161850.013.26024245-49
ATCGGAA560900.013.1660792
TCGGAAG565700.013.0713883
CGGAAGA578050.012.7670364
CTCGTAT180350.011.69028340-44
TCTCGTA180050.011.556746540-44
CGTATGC182700.011.36598145-49
ATGCCGT195350.010.77843445-49
GCCGTCT203650.010.19570150-54
ATCTCGT213000.09.57155540-44
CGTCTTC236300.09.35146650-54
AGAGCAC813700.09.2566518
CCGTCTT239250.08.94525850-54
GAGCACA852800.08.908759
GAAGAGC898400.08.5372616
TCGTATG199900.07.631420645-49
GTATGCC294700.07.622083745-49
TGCCGTC202250.07.534816750-54
AAGAGCA1147200.06.8058017
Produced by FastQC (version 0.11.5)