FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004815

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004815
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59873223
Sequences flagged as poor quality0
Sequence length151
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG100750.011.15291645-49
CTCGTAT118150.09.68236140-44
TCTCGTA121600.08.89494340-44
ACGACGC17353.2196112E-108.7754376
ATGCCGT135800.08.38111345-49
GATCGGA414000.08.1750291
TCGGAAG431950.07.93980073
ATCGGAA433550.07.91664842
CGTATGC119250.07.842113545-49
CGGAAGA456200.07.50185544
CGTGTAG160600.07.13210630-34
CACGACG25802.8740033E-107.02539445
CCGTGTA167550.06.90549330-34
CGACGCT21551.6352351E-76.72804457
GCCGTCT141550.06.576012650-54
CGTCTTC180600.06.486809750-54
TAGATCG159500.06.408621145
GTCACCG180050.06.40229725-29
AGATCGG421750.06.1708574145
ATCTCGT157700.05.89337840-44
Produced by FastQC (version 0.11.5)