FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004832

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004832
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54181544
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG60650.08.370033145
CGTCGTG383150.06.927431145
AGCGTCG424450.05.9116607145
GCGTCGT389500.05.4646707140-144
GATCGGA626050.05.374882145
GTCGTGT392900.05.352737145
TCGGAAG639650.05.147228145
CGTGTAG393400.05.1247225145
GAGCGTC490900.05.0966644145
ATCGGAA629000.05.0844955145
AGATCGG661400.05.0437503145
TCGTGTA374700.05.0127497145
Produced by FastQC (version 0.11.5)