FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004850

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004850
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28270219
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG112050.05.887438145
CGTCGTG101950.05.617417145
GCGTCGT103550.05.460612145
GAGCGTC140900.05.299355145
ATCGGAA176600.05.2132654145
GTCGTGT115450.05.086135145
AGATCGG183300.05.0227094145
Produced by FastQC (version 0.11.5)