FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005004875

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004875
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82337107
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA384750.07.1206551
TATGCCG128050.06.827754545-49
ATCGGAA411800.06.73193652
TCGGAAG433900.06.24836353
TCTCGTA144750.06.02991640-44
CTCGTAT147150.06.020246540-44
CGGAAGA469200.05.97911934
CGTATGC152350.05.719686545-49
AGATCGG401000.05.69481145
ATGCCGT177000.05.054196445-49
Produced by FastQC (version 0.11.5)