Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005004883 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 67580866 |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 41 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GATCGGA | 33065 | 0.0 | 6.776633 | 1 |
TATGCCG | 10380 | 0.0 | 6.7609234 | 45-49 |
ATCGGAA | 35440 | 0.0 | 6.429218 | 2 |
TCGGAAG | 37095 | 0.0 | 6.2340126 | 3 |
CGGAAGA | 39035 | 0.0 | 5.8870463 | 4 |
CTCGTAT | 12280 | 0.0 | 5.7144794 | 40-44 |
CGTATGC | 12355 | 0.0 | 5.668425 | 45-49 |
AGATCGG | 35140 | 0.0 | 5.653031 | 145 |
TCTCGTA | 12370 | 0.0 | 5.579136 | 40-44 |
ATGCCGT | 14170 | 0.0 | 5.106093 | 45-49 |
TATCTCG | 13200 | 0.0 | 5.0306168 | 40-44 |