FastQCFastQC Report
Mon 13 May 2024
EGAF00005004907

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004907
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences226297744
Total Bases6.3 Gbp
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA2516580.11120658807804995No Hit
CGTTCGTTATCGGAATTAACCAGACAAA2496590.11032323857369077No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG2382880.10529844256865414No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)