FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004952

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004952
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19060855
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA128500.09.6241211
TATGCCG32500.09.50212945-49
TCGGAAG136750.09.3827793
ATCGGAA134300.09.33803752
CGGAAGA141400.09.2792884
CGTATGC37650.08.16385945-49
CTCGTAT38150.07.980992340-44
TCTCGTA36550.07.9733540-44
ATGCCGT45450.06.82660145-49
GCCGTCT47750.06.254816550-54
TAGATCG46200.06.119487145
TCGTATG42950.05.974956545-49
ATCTCGT49800.05.85192740-44
AGAGCAC240650.05.6932668
TGCCGTC45300.05.632941750-54
GAGCACA260600.05.5633819
CGTCTTC60850.05.480094450-54
GAAGAGC272150.05.2740286
CATCTCG60050.05.21522340-44
ACCGCGC57950.05.1773551
Produced by FastQC (version 0.11.5)