FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004984

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004984
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61128506
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG120250.09.16391945-49
GATCGGA508300.08.8385861
ATCGGAA525700.08.6775882
TCGGAAG526400.08.6769523
CGGAAGA540950.08.3496194
CGTATGC139100.07.849112545-49
CTCGTAT141200.07.75288440-44
TCTCGTA141100.07.265130540-44
ATGCCGT158750.07.005422645-49
GCCGTCT167350.06.636751750-54
TTACGGT180100.06.19901830-34
CTTACGG183750.06.020645630-34
TGCCGTC165450.05.96805650-54
ATCTCGT178750.05.88900140-44
TCGTATG164400.05.86506245-49
CGTCTTC202000.05.771082450-54
AGAGCAC847650.05.74731548
TAGATCG192800.05.6798205145
CGGTGAT184700.05.61309135-39
GAGCACA899600.05.59271059
Produced by FastQC (version 0.11.5)