FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005004996

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005004996
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54553941
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG144550.09.44814545-49
CGTATGC169950.07.99341145-49
CTCGTAT168500.07.855388640-44
ATGCCGT176200.07.676964345-49
TCTCGTA164150.07.657288640-44
GATCGGA648450.07.5527911
ATCGGAA664150.07.52096272
TCGGAAG664200.07.50942663
CGGAAGA678650.07.3807564
GCCGTCT187800.07.372525750-54
CGTCTTC217500.06.61909350-54
ATCTCGT202250.06.537370740-44
CCGTCTT223600.06.19861450-54
TGCCGTC182900.05.849936550-54
TCGTATG190150.05.75657845-49
AGAGCAC908300.05.69813548
GAGCACA943650.05.6536379
GAAGAGC1003650.05.32295276
GTATGCC297450.05.112993745-49
ACACGTC485550.05.0925484145
Produced by FastQC (version 0.11.5)