FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005002

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005002
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19217566
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG35950.07.21940945-49
GATCGGA152800.06.33846951
CTCGTAT42250.06.28018440-44
ATCGGAA157800.06.20341872
TCTCGTA40600.06.17828740-44
TCGGAAG161250.05.98075873
CGTATGC44600.05.91676145-49
CGGAAGA167700.05.8363414
ATGCCGT49000.05.385460445-49
TAGATCG53705.456968E-125.131738145
ATCTCGT53200.05.069315440-44
GCCGTCT53350.05.00080350-54
Produced by FastQC (version 0.11.5)