FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005029

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005029
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70980962
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG56900.05.605709145
CGTCGTG284250.05.585136145
GATCGGA455650.05.4410768145
ATCGGAA470400.05.208822145
GAGCGTC380550.05.162353145
AGCGTCG302500.05.1523247145
AGATCGG495450.05.018621145
Produced by FastQC (version 0.11.5)