FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005031

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005031
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68779673
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGTCG189900.06.03602145
CGTCGTG175200.05.9213467145
GATCGGA303100.05.648649145
ATCGGAA326800.05.52759145
GCGTCGT173600.05.4744453145
AGATCGG332900.05.2519646145
CGGAAGA370750.05.165844145
GAGCGTC260550.05.123247145
Produced by FastQC (version 0.11.5)