FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005138

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005138
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences36709319
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC23050.011.3432851
GGCGACC37500.07.54824732
GCGACCA34850.07.28172163
CGACCAC41400.06.30398754
GATCGGA294350.05.6651716145
ACACGTC215750.05.511151145
CGTCTGA194750.05.435314145
ACGTCTG229650.05.3038607145
TCGGAAG305250.05.272864145
AGATCGG311400.05.2618575145
ATCGGAA300500.05.022966140-144
Produced by FastQC (version 0.11.5)