FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005005198

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005198
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences27923212
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAGCGTC192200.06.4485889
GCGTCGG22402.241717E-66.1516557145
AGAGCGT214350.05.88356648
GATCGGA233100.05.2291141
TCGGAAG244500.05.12803553
ATCGGAA242650.05.0803042
CGCCGTA51100.05.05020745-49
AGCGTCG163900.05.044433145
AAGAGCG252200.05.02922257
CGGAAGA257750.05.00519134
Produced by FastQC (version 0.11.5)