FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005279

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005279
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64474428
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG152450.09.42541845-49
ATCGGAA622750.09.3961181
TCGGAAG628300.09.2888672
CGGAAGA642000.09.1583823
CGTATGC176850.08.32996340-44
CTCGTAT179000.08.27851240-44
ATGCCGT190450.07.826480445-49
TCGTATG198500.07.684395340-44
TCTCGTA178600.07.647577340-44
TGCCGTC201650.07.549973545-49
GCCGTCT203900.07.33866145-49
TATCTCG191650.07.187352735-39
CGCCAAT204950.07.060590730-34
AGAGCAC936100.06.5210737
AGCACAC978150.06.3074439
GAGCACA996750.06.2624778
CGTCTTC241300.06.255358750-54
ACGCCAA246550.06.07510430-34
GAAGAGC1050600.05.94838575
GATCGGA583350.05.7791967145
Produced by FastQC (version 0.11.5)