FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005289

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005289
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75845480
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC43800.09.3385641
GCGACCA65800.06.9390573
GGCGACC77500.06.17451332
CGACCAC86400.05.5355974
AGATCGG339600.05.337501145
GATCGGA316100.05.2067537145
ACGACGC29400.05.175909525-29
ATCGGAA346300.05.171424145
Produced by FastQC (version 0.11.5)