FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005291

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005291
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74309139
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGGCGAC41500.010.3526581
GCGACCA64350.07.32323463
ACGACGC34300.07.05946925-29
TATGCCG107300.06.689010645-49
GGCGACC75250.06.35880572
CGACGCT37600.06.324200625-29
GATCGGA371250.06.0020961
CACGACG42350.05.923004620-24
CGACCAC80550.05.7602444
ATCGGAA398750.05.6909112
CTCGTAT131450.05.614479540-44
TCGGAAG416200.05.46972753
AGATCGG395150.05.3022404145
TCTCGTA134150.05.263693340-44
CGTATGC127100.05.19065645-49
CGGAAGA448000.05.032794
Produced by FastQC (version 0.11.5)