FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66071722
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGGGA79850.011.3269461
AGCGTCG385700.09.86642559
GCGTCGG54450.09.855127145
AGCGGCG93850.09.4227089
CGCCGTA128650.09.39835645-49
GAGCGTC452750.08.46923358
GCCGTAT158500.07.838756645-49
AGAGCGT504500.07.7441637
GTCGCCG169450.07.43342140-44
ATCGGAA572200.07.3551921
TCGGAAG583750.07.2513532
AAGAGCG598550.07.0838036
CCGTATC181350.06.97898645-49
CGGAAGA615350.06.92570833
TGGTCGC187700.06.803339540-44
CGTATCA187950.06.68763245-49
GGTCGCC195650.06.68247340-44
GTGGTCG202450.06.443699440-44
GAGCGGC142600.06.3030258
AGAGCGG167350.05.58741437
Produced by FastQC (version 0.11.5)