FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005324

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005324
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63130884
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGGCG86600.011.2182179
CGCCGTA109200.011.2052545-49
AGCGTCG356400.010.9237939
GCGTCGG45300.010.083627145
GAGCGTC423250.09.4053048
GCCGTAT139100.09.09889945-49
ATCGGGA74250.09.0154871
GTCGCCG145000.08.78948840-44
AGAGCGT470350.08.4943077
GAGCGGC125350.08.2141288
AAGAGCG566350.08.0908196
ATCGGAA555150.08.0474051
TCGGAAG562450.07.9946452
CCGTATC162450.07.889223645-49
CGTATCA166450.07.795446445-49
TGGTCGC162450.07.640059540-44
GGTCGCC169750.07.584830340-44
CGGAAGA594400.07.57560733
AGAGCGG152450.07.4674057
GTGGTCG176600.07.118214640-44
Produced by FastQC (version 0.11.5)