FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005407

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005407
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60428764
Sequences flagged as poor quality0
Sequence length151
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCCGTA83600.08.305757555-59
GAGCGTC402000.07.3027889
TCGCCGT101900.06.88527455-59
AGAGCGT449250.06.7283538
GCCGTAT113750.06.295432655-59
GATCGGA467650.06.1772551
ATCGGAA485350.06.12314942
GTCGCCG120050.06.061660355-59
TCGGAAG499000.05.9410243
AAGAGCG529750.05.8427417
CGGAAGA521450.05.79633244
TGGTCGC137250.05.260287350-54
CGTATCA141200.05.14377360-64
GTGGTCG148150.05.039622350-54
Produced by FastQC (version 0.11.5)