FastQCFastQC Report
Tue 19 Apr 2022
EGAF00005005458

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005005458
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72872938
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGACGC22551.2732926E-118.037376
TATGCCG90650.06.845703645-49
CGACGCT25952.390152E-96.70493137
GATCGGA334600.06.00099561
CACGACG29202.9755029E-85.95869975
ATCGGAA356300.05.73816632
TCGGAAG367050.05.66864823
CTCGTAT111350.05.40400740-44
AGATCGG349950.05.38851145
CGGAAGA393550.05.3053674
TCTCGTA113100.05.06398740-44
Produced by FastQC (version 0.11.5)